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IRootLab
An Open-Source MATLAB toolbox for vibrational biospectroscopy
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Files | |
file | about.m |
About Dialog. | |
file | ask_dataset.m |
Browses datasets present in workspace for GUI user to choose one. | |
file | ask_hierarchy.m |
Asks uses to type in dataset class levels (for varying purposes). | |
file | ask_peakdetector.m |
Asks for a peak detector object. Specifying one or not will be optional to the user. | |
file | buggui.m |
buggui Dialog | |
file | irerrordlg.m |
Error dialog. | |
file | orhistgui.m |
GUI to preview the action outlier removal. | |
file | orhistgui_find_handles.m |
Finds handles for orhistgui. | |
file | orhistgui_refresh.m |
Refreshes controls in orhistgui. | |
file | orhistgui_set_remover.m |
Sets block of orhistgui. | |
file | orhistgui_show.m |
Calls GUI to preview the action outlier removal. | |
file | orhistgui_view1.m |
Draws histogram in orhistgui. | |
file | orhistgui_view2.m |
Draws datasets in orhistgui. | |
file | send_error_gui.m |
send_error_gui Dialog | |
file | blockmenu.m |
Class Selection Dialog. | |
file | datatool.m |
datatool, see also objtool.m | |
file | gendata.m |
Lets the user create a dataset by clicking the mouse and pressing the number keys. | |
file | irootgui.m |
Calls the main GUI. | |
file | irootlabgui.m |
OpenSpec main GUI. | |
file | mergetool.m |
Tool to merge several single-spectrum files into a dataset. | |
file | objtool.m |
Object browser. | |
file | sheload.m |
GUI for loading datasets from the SHEware database. | |
file | uip_as_crossc.m |
Properties Window for Cross-calculation Analysis Session. | |
file | uip_as_fsel_forward.m |
Properties Window for as_fsel_forward (Forward Feature Selection) Number of features - see as_fsel_forward::nf_select. | |
file | uip_as_fsel_grades.m |
Properties Window for as_fsel_grades. | |
file | uip_as_grades_fsg.m |
Properties Window for as_grades_fsg. | |
file | uip_factorscurve.m |
Rater (rater) Properties Window. | |
file | uip_fselrepeater.m |
Properties Window for fselrepeater. | |
file | uip_gridsearch.m |
Grid Search Properties Window. | |
file | uip_ovrcurves.m |
Properties Window for blmisc_split_ovr. | |
file | uip_rater.m |
Rater (rater) Properties Window. | |
file | uip_reptt.m |
Repeated Train-Test (reptt) Properties Window. | |
file | uip_reptt_bag.m |
Properties Window to create a Cascade Block. | |
file | uip_reptt_blockcube.m |
Properties Window for a reptt_blockcube. | |
file | uip_reptt_hiesplit.m |
Properties Window for a reptt_hiesplit. | |
file | uip_subsetsprocessor.m |
Properties Window for subsetsprocessor. | |
file | uip_blbl_extract_cv.m |
Properties Windows for blbl_extract_cv. | |
file | uip_blbl_extract_ds_from_sovalues.m |
Properties Window for blbl_extract_ds_from_sovalues. | |
file | uip_blmisc_classes_from_clus.m |
Properties Window for the "Classes from cluster" block. | |
file | uip_blmisc_classlabels_hierarchy.m |
Properties Window for blmisc_classlabels_hierarchy. | |
file | uip_blmisc_classlabels_rename.m |
Properties Windows for blmisc_classlabels_rename. | |
file | uip_blmisc_fearange.m |
Properties Window for blmisc_fearange. | |
file | uip_blmisc_rowsout_distr.m |
Dialogbox for Distribution-based Outlier Removal. | |
file | uip_blmisc_rowsout_hist.m |
Properties Windows for blmisc_rowsout_hist. | |
file | uip_blmisc_rowsout_kernel.m |
Properties Window for Kernel-based Outlier Removal. | |
file | uip_blmisc_rowsout_multistage.m |
Properties Window for a Multi-stage Outlier Removal block. | |
file | uip_blmisc_rowsout_ranges.m |
Properties Window for Range-based Outlier Removal. | |
file | uip_blmisc_split_classes.m |
Properties Window for blmisc_split_classes. | |
file | uip_blmisc_split_ovo.m |
Properties Window for blmisc_split_ovo. | |
file | uip_blmisc_split_ovr.m |
Properties Window for blmisc_split_ovr. | |
file | uip_blmisc_split_proportion.m |
Properties Windows for blmisc_split_proportion. | |
file | uip_rowaggr_nmean.m |
Properties Windows for rowaggr_nmean. | |
file | uip_aggr.m |
Properties Window for aggr. | |
file | uip_aggr_adaboost.m |
Properties Window for aggr_adaboost. | |
file | uip_aggr_bag.m |
Properties Window for aggr_bag. | |
file | uip_aggr_hiesplit.m |
Properties Window to create a Hie-Split Aggregation. | |
file | uip_aggr_mold.m |
Properties Window for aggr_mold. | |
file | uip_aggr_pairs.m |
Properties Window for aggr_bag. | |
file | uip_clssr_ann.m |
Properties Window for clssr_ann. | |
file | uip_clssr_d.m |
Properties Window for clssr_d. | |
file | uip_clssr_dist.m |
Properties Window for clssr_dist. | |
file | uip_clssr_knn.m |
Properties Window for clssr_knn. | |
file | uip_clssr_mnr.m |
Logistig Regression Properties Window As the logistic regression model does not have any setup parameter at the moment, this script file when is called just creates a new block. | |
file | uip_clssr_svm.m |
Properties Window for clssr_svm. | |
file | uip_clssr_tree.m |
Properties Window for clssr_tree. | |
file | uip_frbm.m |
Properties Window for Fuzzy Rule-Based Model (frbm) | |
file | uip_clus_hca.m |
Properties Window for clus_hca. | |
file | uip_decider.m |
Parameters Window for decider. | |
file | uip_fcon_feaavg.m |
Properties Window for fcon_feaavg. | |
file | uip_fcon_lda.m |
Properties Window for fcon_lda. | |
file | uip_fcon_maxminpos.m |
Properties Window for fcon_maxminpos. | |
file | uip_fcon_mcr.m |
Properties Window for fcon_mcr. | |
file | uip_fcon_mea_norm.m |
Properties Window for fcon_mea_norm. | |
file | uip_fcon_mea_pick.m |
Properties window for fcon_mea_pick. | |
file | uip_fcon_pca.m |
Properties Window for fcon_pca. | |
file | uip_fcon_pls.m |
Properties Window for fcon_pls. | |
file | uip_fcon_resample.m |
Properties Window for fcon_resample. | |
file | uip_fcon_spline.m |
Properties Window for fcon_spline. | |
file | uip_fsel.m |
Properties Window for fsel. | |
file | uip_pre_bc_asls.m |
Properties Window for pre_bc_asls. | |
file | uip_pre_bc_poly.m |
Properties Window for pre_bc_poly. | |
file | uip_pre_bc_rmiesc.m |
Properties Window for pre_bc_rmiesc. | |
file | uip_pre_bc_rubber.m |
Properties Window for Rubberband-like baseline correction. | |
file | uip_pre_diff.m |
Properties Window for pre_diff. | |
file | uip_pre_diff_sg.m |
Properties Window for pre_diff_sg. | |
file | uip_pre_flip_refmean.m |
Properties Window for pre_flip_refmean. | |
file | uip_pre_norm.m |
Properties Window for pre_norm. | |
file | uip_pre_sub_refmean.m |
Properties Window for pre_sub_refmean. | |
file | uip_pre_wden.m |
Properties Window for pre_wden. | |
file | uip_report_estlog.m |
Properties Window for report_estlog. | |
file | uip_report_log_fselrepeater_hist.m |
Properties Window for report_log_fselrepeater_hist. | |
file | uip_report_soitem_fhg_hist.m |
Properties Windows for report_soitem_fhg_hist. | |
file | uip_report_soitem_merger_fhg.m |
Properties Window for report_soitem_merger_fhg. | |
file | uip_report_soitem_merger_merger_fhg.m |
Properties Window for report_soitem_merger_merger_fhg. | |
file | uip_report_soitem_merger_merger_fitest.m |
Properties Window for report_soitem_merger_merger_fitest. | |
file | uip_report_sovalues_comparison.m |
Properties Window for report_sovalues_comparison. | |
file | uip_report_testtable.m |
Properties Window for report_testtable. | |
file | uip_report_ttlog.m |
Properties Window for report_ttlog Generate time snapshot confusion matrices - see report_ttlog::flag_individual. | |
file | uip_vis_stackedhists.m |
Properties Window for vis_stackedhists. | |
file | uip_block_cascade.m |
Properties Window to create a Cascade Block. | |
file | uip_block_cascade_base.m |
Calls Properties GUIs for all component blocks. | |
file | uip_pre_sigwindow.m |
Properties Window for pre_sigwindow. | |
file | uip_vis_as_fsel.m |
Properties Window for vis_as_fsel. | |
file | uip_vis_as_grades.m |
Properties Window for vis_as_grades. | |
file | uip_vis_cov.m |
Properties Window for vis_cov. | |
file | uip_vis_curvefit.m |
Properties Window for vis_curvefit. | |
file | uip_vis_cv.m |
Properties Window for vis_cv. | |
file | uip_vis_featuregrades.m |
Properties Dialog for vis_featuregrades. | |
file | uip_vis_grades.m |
Properties Window used by uip_vis_loadings.m and uip_vis_cv.m. | |
file | uip_vis_hists.m |
Properties Window for vis_hists. | |
file | uip_vis_image.m |
Properties Window for vis_image. | |
file | uip_vis_image_cat.m |
Properties Window for vis_image_cat. | |
file | uip_vis_loadings.m |
Properties Window for vis_loadings. | |
file | uip_vis_log_as_fsel.m |
Properties Window for vis_log_as_fsel. | |
file | uip_vis_log_grades.m |
Properties Windows for vis_log_grades. | |
file | uip_vis_log_ovrcurves.m |
Properties Windows for vis_log_ovrcurves. | |
file | uip_vis_means.m |
Properties Windows for vis_means. | |
file | uip_vis_scatter1d.m |
Properties Window for vis_scatter1d. | |
file | uip_vis_scatter2d.m |
Properties Window for vis_scatter2d. | |
file | uip_vis_scatter3d.m |
Properties Window for vis_scatter3d (3D Scatter Plot) | |
file | uip_vis_scatter3d2.m |
Properties Window for vis_scatter3d2. | |
file | uip_vis_scatter3dgif.m |
Properties Window for vis_scatter3dgif (3D GIF animation) | |
file | uip_vis_sovalues_drawimage.m |
Properties Window for vis_sovalues_drawimage. | |
file | uip_vis_sovalues_drawplot.m |
Properties Window for vis_sovalues_drawplot. | |
file | uip_vis_sovalues_drawsubplot.m |
Properties Window for vis_sovalues_drawsubplot. | |
file | uip_dataio_txt_basic.m |
Asks user whether to use x-axis range from file or a custom one. | |
file | uip_dataio_txt_basic_image.m |
Properties Windows for dataio_txt_basic_image. | |
file | uip_dataio_txt_dpt.m |
Properties Window for vis_image. | |
file | uip_dataio_txt_pir_image.m |
file | uip_fsg_clssr.m |
Properties Window for fsg_clssr. | |
file | uip_fsg_test_anova.m |
Properties Window for fsg_test_anova. | |
file | uip_fsg_test_manova.m |
Properties Window for fsg_test_manova. | |
file | uip_fsg_test_t.m |
Properties Window for fsg_test_t. | |
file | uip_fsg_test_u.m |
Properties Window for fsg_test_u. | |
file | uip_estlog_classxclass.m |
Properties Window for estlog_classxclass. | |
file | uip_estlog_groupxclass.m |
Properties Window for estlog_groupxclass. | |
file | uip_estlog_rightwrong.m |
Properties Window for estlog_rightwrong. | |
file | uip_vis_crossloadings.m |
Properties Window for vis_crossloadings - fold-wise loadings vectors resulting from cross-calculation. | |
file | uip_peakdetector.m |
Properties Window for peakdetector. | |
file | uip_sgs.m |
Properties Window common to all sgs classes. | |
file | uip_sgs_crossval.m |
Properties Window for K-Fold Cross-validation (sgs_crossval) | |
file | uip_sgs_randsub.m |
Properties Window for Random subsampling (sgs_randsub) | |
file | uip_sgs_randsub_base.m |
Properties Window for Random sub-sampling (sgs_randsub_base) | |
file | uip_logrecorder.m |
Log recorder Properties Window. | |
file | uip_vectorcomp_ttest.m |
Properties Window for vectorcomp_ttest. | |
file | uip_vectorcomp_utest.m |
Properties Window for vectorcomp_utest. | |
file | welcome.m |
welcome Dialog | |
file | create_default_objects.m |
Creates a few objects in the base workspace. | |
file | rename_object.m |
Renames object. | |
file | iroot.m |
Calls the IRootLab main GUI. | |
file | irootlab.m |
Calls the IRootLab main GUI. | |