IRootLab
An Open-Source MATLAB toolbox for vibrational biospectroscopy
Non-official methods from the irdata class

Detailed Description

Files

file  data_draw.m
 Draws "all curves in dataset".
 
file  data_draw_3dhist.m
 Draws the 3D figure: per-feature Histograms.
 
file  data_draw_covariance.m
 Draws covariance matrix.
 
file  data_draw_hachures.m
 Draws class means with hachured aread behind to give an idea of variability.
 
file  data_draw_means.m
 Draws class means.
 
file  data_draw_pca_pareto.m
 PCA pareto chart (number of PCs)x(% variance explained)
 
file  data_draw_scatter_1d.m
 Draws 1-D scatter plot with optional per-class distributions.
 
file  data_draw_scatter_2d.m
 Draws 2-D scatter plot.
 
file  data_draw_scatter_3d.m
 Draws 3-D scatter plot.
 
file  data_draw_scatter_3d2.m
 Draws 3-D scatter plot-ellipse walls.
 
file  draw3d2_adjust.m
 draw3d2_adjust
 
file  draw3d2_core.m
 draw3d2_core
 
file  draw3d2_get_minmax.m
 draw3d2_get_minmax
 
file  data_assign_splitidxs.m
 Assigns the splitidxs property based on hierarchy.
 
file  data_get_cv.m
 Calculates the "cluster vectors".
 
file  data_get_legend.m
 Returns selected elements from data.classlabels according to the classes actually present in data.classes.
 
file  data_isolate_class.m
 Isolates a particular class, so it will be class 0 and all the other will be class 1.
 
file  data_merge_cols.m
 Merges several datasets into one (column-wise)
 
file  data_merge_rows.m
 Merges several datasets into one (row-wise)
 
file  data_rename_classlabels.m
 searches and replaces class labels
 
file  data_renumber_classes.m
 Renumbers classes to match the class order of a reference dataset.
 
file  data_select_groups.m
 Selects data rows by giving group indexes as parameters.
 
file  data_select_hierarchy.m
 Selects certain levels within the class labels.
 
file  data_select_inliers.m
 Selects only the data rows whose class is >= 0.
 
file  data_sort_by_group.m
 Sorts dataset rows by groupcode.
 
file  data_sort_classlabels.m
 Sorts data.classlabels and renumbers data.classes accordingly.
 
file  data_split_classes.m
 Splits data according to classes. Returns an array of structures.
 
file  data_split_classmap.m
 Splits dataset according to class map.
 
file  data_split_groups.m
 Splits data according to groups. Returns an array of datasets.
 
file  data_split_sgs.m
 Splits data using SGS. Returns an array of structures.
 
file  detect_file_type.m
 does a series of tests on the dataset file to try to guess its format
 
file  data_eliminate_var0.m
 Eliminates low-variance features.